Hi Fadhl,

Yes, we use `sceasy` to convert Seurat or SingleCellExperiment object to h5ad. You could also try it yourself if you like.

Could you please provide a brief description (donor, tissue, etc) of the dataset you are considering submitting?

Best,

From: Alakwaa, Fadhl <alakwaaf@med.umich.edu>
Sent: Thursday, December 17, 2020 2:57:23 PM
To: cv19caingest@sanger.ac.uk
Subject: [Cv19caingest] files format to upload our data [EXT]

Hello,

How can I submit our rds files, shall you convert it in h5ad format?

Regards

Fadhl Alakwaa, PhD

Michigan Medicine

University of Michigan

https://github.com/FADHLyemen/experience_summary [github.com]

https://www.linkedin.com/in/fadhl-alakwaa/ [linkedin.com]

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