- pgpviewer-announce - public-lists.sanger.ac.uk

Sus Scrofa 10.2 PGP viewer is now available.
by PGPviewer Announcements 21 May '12

21 May '12

In conjunction with the release of Pig 10.2 in the core ensembl browser, a pgpviewer based on the 10.2 assembly has also been released. This can be found here: http://pgpviewer.ensembl.org/vertebrates.html ==== Mailing List UPDATE ==== The pgpviewer-announce mailing list has been moved recently to http://publists.sanger.ac.uk/mailman/listinfo/pgpviewer-announce If you need to make changes to your account, you can do it through this address. Any questions, comments please email pgp-help(a)sanger.ac.uk

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PGPviewer Maintenance Period this Easter Weekend, APR 5-10
by PGPviewer Announcements 10 Apr '12

10 Apr '12

Hi, The PGP viewer will be down from 6pm BST Apr 5 to the morning of Apr 10 for maintenance. During this time, there will be work done to all databases used in the viewer and access will not be available. If this disrupts your work, please email pgp-help(a)sanger.ac.uk to discuss possible alternatives. Sorry for the inconvenience caused. Will

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New Human PGPviewer
by PGPviewer Announcements 08 Nov '11

08 Nov '11

Just a short notice to let you know a new human PGPviewer (path freeze 2.11.2011) has been released. The inter-species comparison will be added soon. Best wishes, Kerstin -- Dr. Kerstin Howe Senior Scientific Manager Genome Reference Informatics (Team 135) kerstin(a)sanger.ac.uk Wellcome Trust Sanger Institute Hinxton, Cambridge CB10 1SA, UK

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PGP viewer downtime period 21st/22nd/23rd OCTOBER 2011
by PGPviewer Announcements 12 Oct '11

12 Oct '11

Hi PGP viewer users, As you may have already noticed on the frontpage of the viewer, the viewers blog or the viewers twitter account, the PGP viewer will be offline during the period between the 21st of October to the 23rd of October. This email is just a friendly reminder. This downtime is due to planned maintenance and shutdown of the Hinxton Data Centre. During this period many of the genome campus's computational and web resources will be offline. Any new changes or developments will be updated on the blog and twitter account found here: http://pgpviewer.blogspot.com/ http://twitter.com/#!/pgpviewer Any questions, comments please email pgp-help(a)sanger.ac.uk

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PGP Compara analysis Update
by PGPviewer Announcements 24 Aug '11

24 Aug '11

Hi, Compara analysis has been added to the recent human and mouse pgp viewer updates. -human pgp viewer : 2011-08-03 -mouse pgp viewer : 2011-08-02 Again, a quick example of usage can be found here: http://pgpviewer.blogspot.com/2011/08/pgp-compara-multiple-assembly-analysi… any issues, questions, comments, please email pgp-help(a)sanger.ac.uk Will

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PGP Compara, Cross Assembly Alignment Analysis
by PGPviewer Announcements 12 Aug '11

12 Aug '11

Hi, Compara functionality is now added to the pgp viewer. What this means is you can now compare certain assemblies against each other. In most cases, pgp or agp viewers are compared to wgs assemblies. Visually the analysis will display all the assemblies being compared against each other and return their syntenic regions in the browser. For a 2-3 min quick example on what you can use Compara for, check out this entry from the blog: http://pgpviewer.blogspot.com/2011/08/pgp-compara-multiple-assembly-analysi… Please note for the most recent pgpviewers released yesterday, the compara analysis are not available, but will be shortly. The current assemblies with compara are listed in the blog. Any other issues, questions or comments please email pgp-help(a)sanger.ac.uk Will

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new human and mouse PGPviewers
by PGPviewer Announcements 11 Aug '11

11 Aug '11

New human and mouse PGPviewers have been released today, built on path freezes from the 3rd and 2nd of August 2011, respectively. Best wishes, Kerstin -- Dr. Kerstin Howe Senior Scientific Manager Genome Reference Informatics (Team 135) kerstin(a)sanger.ac.uk Wellcome Trust Sanger Institute Hinxton, Cambridge CB10 1SA, UK

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human NCBI36 AGPviewer
by PGPviewer Announcements 21 Jul '11

21 Jul '11

We've just released an AGPviewer on the human NCBI36 assembly. Check it out at http://pgpviewer.ensembl.org/homo_sapiens.html Best wishes Kerstin -- Dr. Kerstin Howe Senior Scientific Manager Genome Reference Informatics (Team 135) kerstin(a)sanger.ac.uk Wellcome Trust Sanger Institute Hinxton, Cambridge CB10 1SA, UK

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TEST ANNOUCNE
by PGPviewer Announcements 18 Jul '11

18 Jul '11

ADMIN

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