Welcome to the ninth Human Cell Atlas newsletter
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** Issue 9: October 2021
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Dear HCA Members,
Welcome to the ninth Human Cell Atlas newsletter! We hope that you are keeping well.
The virtual 2021 HCA General Meeting in June was a great success with the largest
attendance to date. This and other recent meetings show the value of collaboration and
bringing people together to achieve our goals. We are looking forward to the upcoming HCA
Asia meeting next month, which will continue to enhance scientific excellence and
collaboration across the globe.
We hope you will enjoy the news from our community, highlighting the collaborative spirit
and fabulous science of HCA members.
Best regards,
The Human Cell Atlas Team
Table of Contents
* 2021 HCA Asia General Meeting - Registration Open
* HCA Website - Survey and Updates
* Selected webpage updates:
* Highlights from the Ethics Working Group (EWG)
* HCA Developmental and Pediatric Cell Atlas Meeting 2021 (Virtual)
* CZI Pediatric Networks
* HCA Publications - Approval Procedure
* One Cell At A Time - Virtual Exhibition & Live Events Programme
* Commercial Agreements to Empower Science
* Upcoming Events
* Useful Contacts
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** 2021 HCA Asia General Meeting - Registration Open
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November 15 - 16 2021
We’re looking forward to the fifth HCA Asia Meeting, which will take place virtually on
November 15 – 16th, 2021. The meeting aims to synergize on common goals with shared
interests, to broaden representation of communities across Asia, and to enhance scientific
impact in the region and across the globe. Main sessions will take place 9.30-5.30 CST /
AWST.
We hope you are able to join us. Register here
(
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) .
** HCA Website - Survey and Updates
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We are updating some of the pages on the HCA website. Please help us improve the website
(
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) , by sharing your feedback.
Please fill in this form
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) to describe your experience as you explore the HCA website
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) . The information you provide will be anonymised, analysed and shared with the team
developing the website, to inform future improvements.
Any questions, please email execofficeuk(a)humancellatlas.org (mailto:) .Thank you for your
help.
** Selected webpage updates:
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* Homepage
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)
* Publications page
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)
* Learn more
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)
HCA General Meeting 2021 (Virtual)
The 10th HCA General Meeting was held virtually June 28 – 30th, 2021. More than 1200
people from 43 countries joined us to hear updates on cross-cutting HCA technologies and
computational advancements.
The H
(
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) CA Biological Networks
(
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) were a main focus of the meeting, with breakout
sessions to brainstorm and discuss recent findings, challenges and future directions. The
summaries of these breakout discussions are now on the Biological Networks
(
https://urldefense.proofpoint.com/v2/url?u=https-3A__humancellatlas.us19.li…
) web page.
The event website here
(
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) will be live until June 2022. You can log on to view the
program and recordings and learn more about the speakers and panellists.
The recordings from the plenary sessions are also available on
our YouTube
(
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) and Bilibili
(
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) channels.
Many thanks to the following supporters for making this meeting possible, Chan Zuckerberg
Initiative
(
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) , Helmsley Charitable Trust
(
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) , The Kavli Foundation
(
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) , The Klarman Family Foundation
(
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) and Wellcome Trust
(
https://urldefense.proofpoint.com/v2/url?u=https-3A__humancellatlas.us19.li…
) .
HCA General Meeting in Numbers
Latin America Single-Cell RNA-Seq Data Analysis Workshop 2021 (Virtual)
The HCA Latin America Network is gaining momentum after the second HCA Latin America
Workshop, 26th April - 7th May. This workshop taught participants how to design
single-cell RNA-seq experiments, and manage and analyze data. The two-week program
included a week-long, hands-on workshop where participants analyzed single-cell RNA-seq
datasets from different cancer types. HCA is grateful to the Chan Zuckerberg Initiative
for their support for this activity.
You can watch recordings from this workshop on our YouTube
(
https://urldefense.proofpoint.com/v2/url?u=https-3A__humancellatlas.us19.li…
) and Bilibli
(
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) channels.
** Highlights from the Ethics Working Group (EWG)
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Recent HCA EWG Work:
* Biomedical Research Database - Data Protection Impact Assessment (DPIA) Template link
here
(
https://urldefense.proofpoint.com/v2/url?u=https-3A__humancellatlas.us19.li…
) .
* HCA Developmental & Pediatric Meeting Speaker and Breakout Session (August 27th)
moderated by Dimitri Patrinos and Bartha Maria Knoppers. Recordings are available on the
HCA YouTube
(
https://urldefense.proofpoint.com/v2/url?u=https-3A__humancellatlas.us19.li…
) and Bilibili
(
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) channels.
Forthcoming HCA EWG work:
* Human Cell Atlas – Data Governance Landscape. Anticipated for publication Fall 2021.
* Human Cell Atlas – Consent Clauses and Assent Form: Pediatric Research. Developed in
collaboration with GA4GH, and to be shared on the GA4GH and HCA websites in Fall 2021.
* Human Cell Atlas – Legal and Ethical Cartography - National Implementation of the United
Nations, Convention on the Rights of the Child (1989-2021). First draft anticipated
December 2021.
** HCA Developmental and Pediatric Cell Atlas Meeting 2021 (Virtual)
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The first HCA Developmental and Pediatric Cell Atlas Meeting occurred virtually on August
28 – 30th, 2021. With more than 600 participants and 41 speakers and breakout session
leaders across 31 countries, it successfully brought members of different communities and
disciplines together to help build the human development and pediatric atlas projects.
This community plans to meet again in Autumn 2022 in Paris, France. Stay tuned for more
information.
Log into the event site here
(
https://urldefense.proofpoint.com/v2/url?u=https-3A__humancellatlas.us19.li…
) to view the program and recordings, as well as to learn more about speakers and
panelists. The website will be available until August 2022.
The recordings from the plenary sessions are also available on the HCA YouTube
(
https://urldefense.proofpoint.com/v2/url?u=https-3A__humancellatlas.us19.li…
) and Bilibili
(
https://urldefense.proofpoint.com/v2/url?u=https-3A__humancellatlas.us19.li…
) channels.
Meeting sponsorship
We would like to thank our lead sponsor, Medicine by Design
(
https://urldefense.proofpoint.com/v2/url?u=https-3A__humancellatlas.us19.li…
) , as well as Children’s Hospital of Philadelphia
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) , Cincinnati Children’s
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) , Company of Biologists
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) , Chan Zuckerberg Initiative
(
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) , Genome Canada
(
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) , Hospital for Sick Children
(
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) , McLaughlin Centre
(
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) , and The Klarman Family Foundation
(
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) for making this meeting possible.
https://urldefense.proofpoint.com/v2/url?u=https-3A__humancellatlas.us19.li…
** CZI Pediatric Networks
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The Chan Zuckerberg Initiative (CZI) announced $33 million in grants to support 17
collaborative groups of researchers and pediatricians to contribute healthy pediatric
single-cell reference data to the HCA, to better understand, prevent, and treat childhood
diseases.
These groups of researchers represent 15 different countries, and the reference data will
be a foundational resource for providing insight into the cellular origins of disease
onset in children.
For more information on the grants see here
(
https://urldefense.proofpoint.com/v2/url?u=https-3A__humancellatlas.us19.li…
) .
** HCA Publications - Approval Procedure
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Manuscripts in preparation can be reviewed by the HCA Publication Committee for approval
as HCA publications. We encourage any HCA member to submit their complete draft paper or
preprint for review using this form
(
https://urldefense.proofpoint.com/v2/url?u=https-3A__humancellatlas.us19.li…
) . Full details are available here
(
https://urldefense.proofpoint.com/v2/url?u=https-3A__humancellatlas.us19.li…
) . Approved HCA publications are included on the bioRXiv HCA
(
https://urldefense.proofpoint.com/v2/url?u=https-3A__humancellatlas.us19.li…
) channel.
** One Cell At A Time - Virtual Exhibition & Live Events Programme
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Save the Date: Virtual Exhibition Preview - 28th October 2021 at 5pm GMT
One Cell At A Time
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https://urldefense.proofpoint.com/v2/url?u=https-3A__humancellatlas.us19.li…
) is an ambitious programme of public engagement activities
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) with HCA scientists, bringing together art, science and communities from across the UK.
The work will be displayed at a virtual Exhibition, opening on 29th October 2021, with
additional live events to follow.
For more information about the virtual exhibition and to book your space on the live
events programme, please visit the One Cell At A Time
(
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) website and sign up to the mailing list
(
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) .
HCA Data Coordination Platform
The Data Coordination Platform (DCP)
(
https://urldefense.proofpoint.com/v2/url?u=https-3A__humancellatlas.us19.li…
) now hosts data from nearly 20 million cells, with the number of contributions growing
each month. You can explore the new projects, uniform analyses and cell-by-gene matrices
and follow the latest updates on the DCP website.
https://urldefense.proofpoint.com/v2/url?u=https-3A__humancellatlas.us19.li…
DCP DATA wrangler team is now hosting office hours for contribution questions
Starting this fall, the DCP will host office hours
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) dedicated to answering your data contribution questions. To start the contribution
process, contact the team using wrangler- (mailto:) team(a)data.humancellatlas.org
(mailto:wrangler-team@data.humancellatlas.org) .
Useful link:
EMBL-EBI HCA Project Catalogue
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https://urldefense.proofpoint.com/v2/url?u=https-3A__humancellatlas.us19.li…
)
https://urldefense.proofpoint.com/v2/url?u=https-3A__humancellatlas.us19.li…
** Commercial Agreements to Empower Science
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Since the last newsletter, we are pleased to announce that Analytical BioScience has been
added to the list of companies that provide discounts to HCA Collaborating Members.
For a full list of our Commercial Agreements, please see here
(
https://urldefense.proofpoint.com/v2/url?u=https-3A__humancellatlas.us19.li…
) .
Human Cell Atlas Meeting 2022 (Hybrid)
The next HCA General Meeting will take place June 27 – 29th 2022, in Vienna, Austria. We
are currently exploring ways to maximize capacity, as well as add a virtual component to
the meeting. More information will be available soon.
** Upcoming Events
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* One Cell At A Time online Public Engagement exhibition preview
(
https://urldefense.proofpoint.com/v2/url?u=https-3A__humancellatlas.us19.li…
) (virtual)
+ 28 October 2021
* HCA Asia Meeting
(
https://urldefense.proofpoint.com/v2/url?u=https-3A__humancellatlas.us19.li…
) (virtual)
+ 15-16 November 2021
* Biological Network Webinar Series
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https://urldefense.proofpoint.com/v2/url?u=https-3A__humancellatlas.us19.li…
) featuring the Eye and Pancreas Networks
+ 09 December 2021
* HCA General Meeting (hybrid)
+ 27-29 June 2022
HCA events are free and open to all, so please feel free to share this information with
anyone in your community that may be interested in attending.
Further details about HCA events
(
https://urldefense.proofpoint.com/v2/url?u=https-3A__humancellatlas.us19.li…
) are available here
(
https://urldefense.proofpoint.com/v2/url?u=https-3A__humancellatlas.us19.li…
) .
We hope you will find the content informative and useful. If you have any suggestions or
comments for the newsletter, please send them to newsletter(a)humancellatlas.org
(mailto:newsletter@humancellatlas.org?subject=Suggestion%20for%20the%20HCA%20Newsletter)
Join us on Slack, to hear our latest news via the Human Cell Atlas Slack channel
(
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) .
** Useful Contacts
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General Enquires - hca(a)humancellatlas.org (mailto:hca@humancellatlas.org)
Meeting Enquiry - meetings(a)humancellatlas.org (mailto:meetings@humancellatlas.org) or
asia-meetings(a)humancellatlas.org (mailto:asia-meetings@humancellatlas.org)
Ethics Help Desk - ethics-help(a)humancellatlas.org (mailto:ethics-help@humancellatlas.org)
DCP Help Desk - data-help(a)humancellatlas.org (mailto:data-help@humancellatlas.org)
HCA Executive Office Team - team(a)humancellatlas.org (mailto:team@humancellatlas.org)
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Human Cell Atlas . Wellcome Sanger Inst., Wellcome Trust Genome Campus, Hinxton . Saffron
Walden, Essex CB10 1SA . United Kingdom