Hi Aaron,
Yes, sure, we can add your reference and datasets to the website. Could you please share
the datasets with us?
Many thanks,
Cheers,
Vlad
--
Vladimir Kiselev
CellGen
Informatics<http://www.sanger.ac.uk/science/groups/cellular-genetics-informatics>
Team Leader
Wellcome Sanger Institute
Wellcome Genome Campus
Hinxton, Cambridge, CB10 1SA
Phone: +44 (0) 1223 496850
Message: Mattermost<https://mattermost.sanger.ac.uk/cellgeninf> or
Slack<https://cellgeni.slack.com/>
Web:
https://wikiselev.github.io
From: Aaron James Wilk <awilk(a)stanford.edu>
Date: Wednesday, 6 January 2021 at 17:17
To: "cv19caingest(a)sanger.ac.uk" <cv19caingest(a)sanger.ac.uk>
Subject: [Cv19caingest] Blish lab: New single-cell dataset for COVID-19 cell atlas [EXT]
Hi there,
My name is Aaron Wilk from the Blish lab at Stanford University. Your cell atlas is
currently hosting our early COVID-19 scRNA-seq immune profiling work, and I am excited to
tell you that we have now posted a preprint expanding that initial work to many more
patients across a wider range of disease severity:
https://www.biorxiv.org/content/10.1101/2020.12.18.423363v1
Would you be able to host Seurat .rds and .h5ad for this dataset as well?
Please let me know if you have any questions.
All the best,
Aaron Wilk